Yu-yan LI, Guang ZHENG, Liang LIU. Bioinformatics Based Therapeutic Effects of Sinomenium Acutum[J]. Chinese Journal of Integrative Medicine, 2019,25(2):122-130.
Yu-yan LI, Guang ZHENG, Liang LIU. Bioinformatics Based Therapeutic Effects of Sinomenium Acutum[J]. Chinese Journal of Integrative Medicine, 2019,25(2):122-130.
Yu-yan LI, Guang ZHENG, Liang LIU. Bioinformatics Based Therapeutic Effects of Sinomenium Acutum[J]. Chinese Journal of Integrative Medicine, 2019,25(2):122-130. DOI: 10.1007/s11655-018-2796-6.
Yu-yan LI, Guang ZHENG, Liang LIU. Bioinformatics Based Therapeutic Effects of Sinomenium Acutum[J]. Chinese Journal of Integrative Medicine, 2019,25(2):122-130. DOI: 10.1007/s11655-018-2796-6.
Bioinformatics Based Therapeutic Effects of Sinomenium Acutum
摘要
Abstract
Objective:
2
To decipher the possible mechanisms of
Sinomenium Acutum
(SA) in treating diseases by a bioinformatics method.
Methods:
2
SA ingredients were searched according to Chinese Pharmacopoeia
Chinese Medicine Dictionary and Traditional Chinese Medicines Database (TCMD). Active compounds and target proteins of SA were acquired through the Pubchem platform. Pathway
network and function analyses of SA were performed with ingenuity pathway analysis (IPA)
a bioinformatics analysis platform. Disease
biofunction-target networks were established with Cytoscape.
Results:
2
Eighteen ingredients from SA were obtained. Seven active ingredients with 31 active target proteins were acquired according to PubChem Bioassay test. By IPA analysis
277 canonical pathways belonging to 17 function categories were collected
23 kinds of diseases
21 categories bio-functions were obtained. Based on P value
calculated by IPA
the top 5 significant pathway of SA targets include phosphatidylinositol 3 kinase/Akt (PI3K/Akt) signaling
prostate cancer signaling
macrophage migration inhibitory factor (MIF) regulation of innate immunity
Guanosine-binding protein coupled receptor (GPCR) signaling
and ataxia telangiectasia mutated protein (ATM) signaling. Disease and bio-function network analysis indicated that mitogen activated protein kinase 1 (MAPK1)
MAPK3
p65 nuclear factor κB (RELA)
nuclear factor of κB inhibitor alpha (NFκBIA)
interleukin 1β(IL-1β)
prostaglandin G/H synthase 2 (PTGS2) and tumor protein 53 (TP53) were the critical targets in various diseases treated by SA.
Conclusions:
2
In the different view of target
pathway
disease and bio-function
inflammation was found to be a central theme in many chronic conditions. SA could be used not only as an anti-inflammatory agent
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相关作者
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相关机构
Shanxi Key Laboratory of Traditional Herbal Medicines Processing, Shanxi University of Chinese Medicine
Korean Medicine R&D Center, Dongguk University
College of Pharmacy & Graduate School of Pharmaceutical Sciences, Ewha Womans University
Department of Herbology, College of Korean Medicine, Dongguk University
School of Pharmacy and Department of Medical Oncology, the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University